Row selection in remote sensing from four-row plots of maize and sorghum based on repeatability and predictive modeling.

Abstract

Remote sensing enables the rapid assessment of many traits that provide valuable information to plant breeders throughout the growing season to improve genetic gain. These traits are often extracted from remote sensing data on a row segment (rows within a plot) basis enabling the quantitative assessment of any row-wise subset of plants in a plot, rather than a few individual representative plants, as is commonly done in field-based phenotyping. Nevertheless, which rows to include in analysis is still a matter of debate. The objective of this experiment was to evaluate row selection and plot trimming in field trials conducted using four-row plots with remote sensing traits extracted from RGB (red-green-blue), LiDAR (light detection and ranging), and VNIR (visible near infrared) hyperspectral data. Uncrewed aerial vehicle flights were conducted throughout the growing seasons of 2018 to 2021 with data collected on three years of a sorghum experiment and two years of a maize experiment. Traits were extracted from each plot based on all four row segments (RS) (RS1234), inner rows (RS23), outer rows (RS14), and individual rows (RS1, RS2, RS3, and RS4). Plot end trimming of 40 cm was an additional factor tested. Repeatability and predictive modeling of end-season yield were used to evaluate performance of these methodologies. Plot trimming was never shown to result in significantly different outcomes from non-trimmed plots. Significant differences were often observed based on differences in row selection. Plots with more row segments were often favorable for increasing repeatability, and excluding outer rows improved predictive modeling. These results support long-standing principles of experimental design in agronomy and should be considered in breeding programs that incorporate remote sensing.

Plant phenotyping relevance

RGB・LiDAR・VNIRリモートセンシングによる作物形質抽出について、行選択とプロットトリミングを反復性・収量予測で評価しており、フェノタイピング手法の技術評価が中心である。

Code and data availability

The paper states that remote sensing data, yield data, and the authors' R analysis code are publicly deposited in the Purdue University Research Repository under DOI 10.4231/PF9S-4G38. This is a paper-specific, publicly actionable asset covering both the phenotyping measurements (RGB/LiDAR/VNIR remote sensing traits, 4