Assessing Drought Stress of Sugarcane Cultivars Using Unmanned Vehicle System (UAS)-Based Vegetation Indices and Physiological Parameters

Abstract

Sugarcane breeding for drought tolerance is a sustainable strategy to cope with drought. In addition to biotechnology, high-throughput phenotyping has become an emerging tool for plant breeders. The objectives of the present study were to (1) identify drought-tolerant cultivars using vegetation indices (VIs), compared to the traditional method and (2) assess the accuracy of VIs-based prediction model estimating stomatal conductance (Gs) and chlorophyll content (Chl). A field trial was arranged in a randomized complete block design, consisting of seven cultivars of sugarcane. At the tillering and elongation stages, irrigation was withheld, and then furrow irrigation was applied to relieve sugarcane from stress. The physiological assessment measuring Gs and Chl using a handheld device and VIs were recorded under stress and recovery periods. The results showed that the same cultivars were identified as drought-tolerant cultivars when VIs and traditional methods were used for identification. Likewise, the results derived from genotype by trait biplot and heatmap were comparable, in which TCP93-4245 and CP72-1210 cultivars were classified as tolerant cultivars, while sensitive cultivars were CP06-2400 and CP89-2143 for both physiological parameters and VIs-based identification. In the prediction model, the random forest outperformed linear models in predicting the performance of cultivars in untested crops/environments for both Gs and Chl. In contrast, it underperformed linear models in the tested crops/environments. The identification of tolerant cultivars through prediction models revealed that at least two out of three cultivars had consistent rankings in both measured and predicted outcomes for both traits. This study shows the possibility of using UAS mounted with sensors to assist plant breeders in their decision-making.

Plant phenotyping relevance

UAS搭載センサーによる植生指数で糖濃度?ではなく、糖? ではなくサトウキビの乾燥ストレス、生理形質（気孔コンダクタンス・クロロフィル）を推定し、従来法との比較と予測モデルの精度評価を行っており、フェノタイピング手法が中心的である。

Code and data availability

The supplied blocks describe UAS image collection, physiological measurements, and R-based analysis (metan, ComplexHeatmap, randomForest, glmnet packages), but contain no data availability statement, no public deposit of phenotype datasets, UAS imagery, or author analysis code/scripts. Only generic software and cited R

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