3D reconstruction of root system architecture in urban forest parks based on ground penetrating radar instantaneous amplitude analysis

Abstract

Root system architecture (RSA) is pivotal for comprehending the ecological adaptation strategies and resource acquisition mechanisms of urban flora, playing a vital role in soil stability, carbon sequestration, and ecosystem sustainability. However, the non-destructive detection and precise three-dimensional (3D) reconstruction of RSA within urban environments remain challenging. In this study, a non-destructive reconstruction method utilizing ground-penetrating radar (GPR) technology was developed to achieve 3D reconstruction and visualization of RSA, with the goal of advancing the intelligent construction and precise ecological management of urban forest parks. Field-based GPR surveys of a 9-year-old triploid poplar were conducted using a square grid and concentric circular scanning scheme. A 3D data volume (C-scan) was constructed from two-dimensional (2D) profiles, and the spatial distribution of RSA was reconstructed using instantaneous amplitude analysis. The method was validated by comparing the results with actual root structures in sandy loam environments. The research results of the 1600 ​MHz GPR under the square grid scanning scheme show that extracting the instantaneous amplitude isosurface of GPR can effectively reflect the spatial distribution of roots with diameters greater than 1 ​cm within a depth of 0.4 ​m subsurface. The accuracy of RSA reconstruction can reach 89 ​%. The results demonstrate the applicability of the proposed method for non-destructive environmental monitoring in urban forest parks, showing significant potential for the large-scale detection and reconstruction of subsurface root systems. This research provides a novel approach for RSA reconstruction with significant implications for urban ecosystem management, soil conservation, and climate resilience research. The method enhances our capability to monitor the growth and adaptation of urban roots, laying the groundwork for the large-scale, non-destructive analysis of RSA.

Plant phenotyping relevance

GPRと瞬時振幅解析を用いて樹木根系構造を3D再構成する方法を開発し、実際の根構造との比較で検証しており、根系形態の取得が中心的な研究目的である。

Code and data availability

The paper's Data Availability statement explicitly releases the GPR root scanning data on Zenodo and the RSA reconstruction analysis code on GitHub, both with public URLs matching allowed entries.