Earlier quantification of rice blast impact via instantaneous chlorophyll fluorescence.

Abstract

Background Rice blast, one of the major diseases causing significant rice yield loss, downregulates the photosynthetic activity and induces aggressive spread of cell death causing food security concerns. Hence, earlier quantification of rice blast is imperative for improved management of the disease. Instantaneous chlorophyll fluorescence (e.g., sun-induced chlorophyll fluorescence under sunlight), which is mechanistically linked with photosynthesis at the photosystem scale, has shown the potential for quantifying the impact of abiotic stresses on plant physiology but remains yet to be tested for biotic stresses. Here, we assessed the potential of chlorophyll fluorescence (CF) for quantifying rice blast impact on plant physiology. In particular, we further retrieved the quantum yield of chlorophyll fluorescence (Φ F ) by normalizing the influence of the magnitude of incident radiation. Results Φ F sensitively responded to rice blast within 24 and 96 hours post-inoculation for susceptible and resistant cultivars, respectively. We confirmed that the Φ F showed strong sensitivity in response to different doses of inoculation and to cultivar difference. In addition to Φ F results, we further investigated the role of red to far-red CF ratio (CF R:FR ) in rice blast detection. CF R:FR , which was previously reported to be tightly coupled with chlorophyll contents, captured the impact of rice blast inoculation to some extent while green chlorophyll vegetation index did not show any difference across all inoculated groups. Conclusions We confirmed that the Φ F sensitively responded to rice blast inoculation and differentiated two dose levels of inoculation and low- and high-resistance levels via the comparison of two cultivars. Furthermore, the full spectrum of chlorophyll fluorescence was used to obtain the red to far-red CF ratio and showed its capability for indicating the physiological impact of rice blast. Our findings highlight the unique role of chlorophyll fluorescence in sensitively quantifying rice blast impact. Our approach is highly scalable through sun-induced chlorophyll fluorescence observations and thus will contribute to improving the large-scale management of rice blast.

Plant phenotyping relevance

イネいもち病による植物生理状態をクロロフィル蛍光で定量・識別する手法を評価しており、病害影響の表現型取得が研究の中心である。

Code and data availability

The paper reports rice blast chlorophyll fluorescence measurements, but the authors state 'No datasets were generated or analysed during the current study,' and no public data, image, or code repository is provided. The supplementary file is only referenced as a DOCX without a qualifying URL, and all listed URLs are to

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