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Low-Cost and Rapid Construction of 3D Point Clouds for Field-Grown Cotton and Evaluation of Canopy-Level Traits

Agronomy · 22 Aug 2026 · 10.3390/agronomy16171619

Abstract

Canopy 3D architecture is a critical determinant of light interception, photosynthetic efficiency, and final yield in cotton, yet its rapid and accurate characterisation remains challenging in field conditions. To achieve efficient, non-destructive, and quantitative monitoring of the canopy structure of field-grown cotton, this study proposes a 3D structure-based technology stack for high-efficiency, low-cost, and high-precision phenotyping extraction. This stack directly addresses the technical bottlenecks of traditional 3D data acquisition, namely high cost, long processing time, and low operational efficiency, which have hindered large-scale application. We developed a pipeline that integrates a fast reconstruction algorithm with a scale-recovery mechanism using ground control points (GCPs), enabling the generation of true-scale 3D point clouds from UAV aerial images in a cost- and time-effective manner. Using only 141 UAV images and with a reconstruction time of approximately 20 min, we efficiently reconstructed high-quality, scale-accurate point clouds of two 5.5 m × 5.5 m cotton plots, significantly outperforming SfM-MVS and Instant-NGP in terms of both reconstruction efficiency and point cloud completeness. This method, whose current validation is confined to a single season, one growth stage, and two experimental plots, not only achieves a breakthrough by using fewer input images with high efficiency, but also ensures point cloud accuracy and completeness, showing strong potential for rapid field monitoring and real-time management. Based on the high-quality reconstructed point clouds, we further quantitatively evaluated canopy characteristics at harvest, analyzing the coefficient of variation of canopy height, porosity distribution, and canopy volume fraction. The core shortcomings and optimization strategies for the existing canopy structure were identified, providing scientific data support and practical technical references for precision cultivation management and mechanization-compatible planting in cotton.

Plant phenotyping relevance

UAV画像からの3D点群再構成とスケール復元パイプラインを開発・比較検証し、綿花キャノピー形質を定量化することが研究の中心であるため含める。

abstractthis study proposes a 3D structure-based technology stack for high-efficiency, low-cost, and high-precision phenotyping extraction.
abstractWe developed a pipeline that integrates a fast reconstruction algorithm with a scale-recovery mechanism using ground control points (GCPs), enabling the generation of true-scale 3D point clouds from UAV aerial images
abstractsignificantly outperforming SfM-MVS and Instant-NGP in terms of both reconstruction efficiency and point cloud completeness.
abstractwe further quantitatively evaluated canopy characteristics at harvest, analyzing the coefficient of variation of canopy height, porosity distribution, and canopy volume fraction.

Code and data availability

The supplied blocks describe UAV image acquisition, Splatfacto-based reconstruction, and canopy trait extraction for cotton, but contain no data or code availability statement, no public repository, and no deposited datasets, images, or trained models. The only URL besides the article DOI is the generic nerfstudio Spla

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