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Spatially resolved quantification of wheat kernel vitreousness using hyperspectral imaging and spectral unmixing.

Frontiers in Plant Science · 18 May 2026 · 10.3389/fpls.2026.1832288

Abstract

Introduction: Wheat kernel hardness, vitreousness, and creaseness are key determinants of milling performance, yet they reflect different physical scales of grain structure and are not necessarily coupled. Methods: We developed a digital phenotyping framework based on hyperspectral imaging and spectral unmixing to quantify these traits at both kernel and cultivar levels in a diverse panel of common wheat. Pixel-level spectral unmixing resolved glassy, intermediate, and mealy endosperm components within individual kernels, enabling vitreousness to be expressed as a continuous spatial index. Results: The hyperspectral-derived vitreousness index showed moderate associations with kernel protein content and the protein-to-starch ratio, consistent with variation in endosperm packing density, but weak relationships with kernel hardness and crease geometry. Kernel hardness, primarily determined by puroindoline genotype, showed limited association with bulk protein and starch composition. Crease geometry, quantified using composite indices from RGB images, captured macroscopic grain features largely independent of both hardness and vitreousness. Discussion: These results demonstrate that hardness, vitreousness, and creaseness represent complementary but largely independent dimensions of grain quality, corresponding to molecular-scale adhesion, mesoscale packing, and macroscopic geometry, respectively. The proposed framework provides a scalable, non-destructive approach for resolving intra-kernel heterogeneity, enabling improved digital phenotyping for wheat breeding and quality assessment.

Plant phenotyping relevance

ハイパースペクトル画像とスペクトルアンミキシングを用いて小麦粒の硝子質を定量するデジタル表現型解析フレームワークを開発しており、形質取得手法が中心的である。

abstractWe developed a digital phenotyping framework based on hyperspectral imaging and spectral unmixing to quantify these traits at both kernel and cultivar levels in a diverse panel of common wheat.
abstractPixel-level spectral unmixing resolved glassy, intermediate, and mealy endosperm components within individual kernels, enabling vitreousness to be expressed as a continuous spatial index.

Code and data availability

The paper's data availability statement deposits full hyperspectral image cubes and RGB image datasets on Figshare, and the supplementary material includes Python analysis scripts (Supplementary Code S1–S2) and processed feature tables (Supplementary Table S3) directly reproducing the paper's phenotyping measurements.

Datasetpublic

full hyperspectral image cubes and associated RGB imagedatasets are available via Research Datas 1 – 3 at Figshare: https://doi.org/10.6084/m9.figshare.31259530

Open resource ↗Figshare · 10.6084/m9.figshare.31259530 · lines:151-201

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