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Ground far-red sun-induced chlorophyll fluorescence and vegetation indices in the US Midwestern agroecosystems.

Scientific data · 22 Feb 2024 · 10.1038/s41597-024-03004-w

Abstract

Sun-induced chlorophyll fluorescence (SIF) provides an opportunity to study terrestrial ecosystem photosynthesis dynamics. However, the current coarse spatiotemporal satellite SIF products are challenging for mechanistic interpretations of SIF signals. Long-term ground SIF and vegetation indices (VIs) are important for satellite SIF validation and mechanistic understanding of the relationship between SIF and photosynthesis when combined with leaf- and canopy-level auxiliary measurements. In this study, we present and analyze a total of 15 site-years of ground far-red SIF (SIF at 760 nm, SIF 760 ) and VIs datasets from soybean, corn, and miscanthus grown in the U.S. Corn Belt from 2016 to 2021. We introduce a comprehensive data processing protocol, including different retrieval methods, calibration coefficient adjustment, and nadir SIF footprint upscaling to match the eddy covariance footprint. This long-term ground far-red SIF and VIs dataset provides important and first-hand data for far-red SIF interpretation and understanding the mechanistic relationship between far-red SIF and canopy photosynthesis across various crop species and environmental conditions.

Plant phenotyping relevance

作物キャノピーの光合成状態を推定する地上SIFについて、取得データセットと処理・校正・フットプリント拡大プロトコルが中心的に提示されており、植物フェノタイピング手法およびデータセットに該当する。

abstractWe introduce a comprehensive data processing protocol, including different retrieval methods, calibration coefficient adjustment, and nadir SIF footprint upscaling to match the eddy covariance footprint.
abstractThis long-term ground far-red SIF and VIs dataset provides important and first-hand data for far-red SIF interpretation and understanding the mechanistic relationship between far-red SIF and canopy photosynthesis across various crop species and environmental conditions.

Code and data availability

The paper's ground far-red SIF760 and vegetation indices dataset (15 site-years, US Corn Belt) is explicitly deposited in a public repository (ORNL DAAC) with a DOI matching an allowed URL.

Datasetpublic

The processed half-hourly SIF760 and VIs are available at the on Oak Ridge National Laboratory Distributed Active Archive Center (ORNL DAAC) data repository https://doi.org/10.3334/ORNLDAAC/213653.

Open resource ↗10.3334/ORNLDAAC/213653 · pdf-page:4 lines:1-47

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