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Non-destructive, whole-plant phenotyping reveals dynamic changes in water use efficiency, photosynthetic efficiency, and rhizosphere acidification of sorghum cultivars under osmotic stress

bioRxiv · 6 Feb 2024 · 10.1101/2023.09.26.559576

Abstract

Noninvasive phenotyping can quantify dynamic plant growth processes at higher temporal resolution than destructive phenotyping and can reveal phenomena that would be missed by end-point analysis alone. Additionally, whole-plant phenotyping can identify growth conditions that are optimal for both above- and below-ground tissues. However, noninvasive, whole-plant phenotyping approaches available today are generally expensive, complex, and non-modular. We developed a low-cost and versatile approach to non-invasively measure whole-plant physiology over time by growing plants in isolated hydroponic chambers. We demonstrate the versatility of our approach by measuring whole-plant biomass accumulation, water use, and water use efficiency every two days on unstressed and osmotically-stressed sorghum accessions. We identified relationships between root zone acidification and photosynthetic efficiency on whole-plant water use efficiency over time. Our system can be implemented using cheap, basic components, requires no specific technical expertise, and is suitable for any non-aquatic vascular plant species.

Plant phenotyping relevance

低コストでモジュール型の非破壊・全植物表現型計測システムを開発し、成長、吸水、WUEなどを経時測定しており、フェノタイピング手法が研究の中心である。

abstractWe developed a low-cost and versatile approach to non-invasively measure whole-plant physiology over time by growing plants in isolated hydroponic chambers.
abstractWe demonstrate the versatility of our approach by measuring whole-plant biomass accumulation, water use, and water use efficiency every two days on unstressed and osmotically-stressed sorghum accessions.

Code and data availability

The supplied blocks describe a hydroponic whole-plant phenotyping study of sorghum (biomass, water use, WUE, FV/FM, rhizosphere pH), but contain no public phenotype dataset, images, analysis code, or repository deposit. A 'Supplemental File 1' with pH data is referenced but no public URL or deposit is given, and nodata

No evidence-backed public reproduction asset is currently recorded.

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