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Hybrid deep learning for smart paddy disease diagnosis using self supervised hierarchical reconstruction and attention based temporal analysis

Scientific reports · 7 Oct 2025 · 10.1038/s41598-025-18672-w

Abstract

Accurate and early disease detection in paddy crops is essential for maximizing crop yield which ensures food security. Traditional methods are often labor-intensive, time-consuming, and domain-specific expertise. Feed-forward deep-learning models will perform accurate disease detection through the identification of spatial patterns. However, they cannot predict the diseases at the early stages due to the lack of temporal information. Temporal observations will help perform continuous monitoring and detect minute changes in the crops at the early times. To tackle this problem, we proposed Self-Supervised Deep Hierarchical Reconstruction (SSDHR), and Long Short-Term Memory (LSTM) which perform early disease detection based on the spatial and temporal data respectively. The SSDHR network uses multi-branch convolution kernels to extract distinct discriminative characteristics rather than conventional leaf-based indicators. It incorporates spatial, and temporal-based attention mechanism Symmetric Fusion Attention (SFA) to improve feature selection and XGBoost (XGB) classifier for better stability. According to experimental findings, the suggested framework achieves a 99.25% accuracy rate in identifying and classifying 13 paddy classes, including normal, blast, hispa, tungro, white stem borer, brown spot, leaf roller, downy mildew, yellow stem borer, bacterial leaf blight, bacterial leaf streak, black stem borer, and bacterial panicle blight.

Plant phenotyping relevance

イネ病害の症状を空間・時間画像データから検出・分類する深層学習フレームワークを提案し、その性能を評価しているため、植物フェノタイピング手法が中心です。

abstractwe proposed Self-Supervised Deep Hierarchical Reconstruction (SSDHR), and Long Short-Term Memory (LSTM) which perform early disease detection based on the spatial and temporal data respectively.
abstractAccording to experimental findings, the suggested framework achieves a 99.25% accuracy rate in identifying and classifying 13 paddy classes

Code and data availability

The paper's phenotyping inputs are the publicly available Paddy Doctor image dataset (16,225 annotated paddy disease images) hosted on IEEE DataPort, with an explicit dataset link and data availability statement. No author analysis code or trained models are shared.

Datasetpublic

The dataset used in our study was obtained from the publicly available repository titled “Paddy Disease and Pest Image Dataset” on IEEE Data Port. The dataset comprises 16,225 high-quality images across 13 classes, including 12 paddy disease and pest categories along with healthy samples.

Open resource ↗IEEE Data Port · html-lines:118-200

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