A Synergistic Framework for Coupling Crop Growth, Radiative Transfer, and Machine Learning to Estimate Wheat Crop Traits in Pakistan

Abstract

The integration of the Crop Growth Model (CGM), Radiative Transfer Model (RTM), and Machine Learning Algorithm (MLA) for estimating crop traits represents a cutting-edge area of research. This integration requires in-depth study to address RTM limitations, particularly of similar spectral responses from multiple input combinations. This study proposes the integration of CGM and RTM for crop trait retrieval and evaluates the performance of CGM output-based RTM spectra generation for multiple crop traits estimation without biased sampling using machine learning models. Moreover, PROSAIL spectra as training against Harmonized Landsat Sentinel-2 (HLS) as testing was also compared with HLS data only as an alternative. It was found that satellite data (HLS, 80:20) not only consistently performed better, but PROSAIL (train) and HLS (test) also had satisfactory results for multiple crop traits from uniform training samples in spite of differences in simulated and real data. PROSAIL-HLS has an RMSE of 0.67 for leaf area index (LAI), 5.66 µg/cm2 for chlorophyll ab (Cab), 0.0003 g/cm2 for dry matter content (Cm), and 0.002 g/cm2 for leaf water content (Cw) against the HLS only, with an RMSE of 0.40 for LAI, 3.28 µg/cm2 for Cab, 0.0002 g/cm2 for Cm, and 0.001 g/cm2 for Cw. Optimized machine learning models, namely Extreme Gradient Boost (XGBoost) for LAI, Support Vector Machine (SVM) for Cab, and Random Forest (RF) for Cm and Cw, were deployed for temporal mapping of traits to be used for wheat productivity enhancement.

Plant phenotyping relevance

CGM・RTM・衛星データ・機械学習を統合し、コムギのLAI、クロロフィル、乾物、水分などの植物形質を推定・比較評価する手法が研究の中心である。

Code and data availability

The supplied blocks describe field LAI measurements via ImageJ, APSIM NG simulations, PROSAIL-generated spectra, HLS satellite reflectance, and ML models (SVM, RF, XGBoost), but contain no data availability statement, repository deposit, or author-provided public URL for any phenotype dataset, imagery, code, or trained

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