← Papers

Unverified paper record

Decomposing leaf mass into metabolic and structural components explains divergent patterns of trait variation within and among plant species

22 Mar 2017 · 10.1101/116855

Abstract

Across the global flora, interspecific variation in photosynthetic and metabolic rates depends more strongly on leaf area than leaf mass. In contrast, intraspecific variation in these rates is strongly mass-dependent. These contrasting patterns suggest that the causes of variation in leaf mass per area (LMA) may be fundamentally different within vs. among species. We developed a statistical modeling framework to decompose LMA into two conceptual components – metabolic LMAm (which determines photosynthetic capacity and dark respiration) and structural LMAs (which determines leaf toughness and potential leaf lifespan) - using leaf trait data from tropical forests in Panama and a global leaf-trait database. Decomposing LMA into LMAm and LMAs improves predictions of leaf trait variation (photosynthesis, respiration, and lifespan). We show that strong area-dependence of metabolic traits across species can result from multiple factors, including high LMAs variance and/or a slow increase in photosynthetic capacity with increasing LMAm. In contrast, strong mass-dependence of metabolic traits within species results from LMAm increasing from sunny to shady conditions. LMAm and LMAs were nearly independent of each other in both global and Panama datasets. Synthesis : Our results suggest that leaf functional variation is multi-dimensional and that biogeochemical models should treat metabolic and structural leaf components separately.

Plant phenotyping relevance

LMAを代謝成分と構造成分に分解する統計モデリング枠組みを開発し、葉形質の推定・予測に用いており、植物形質の計算的抽出が中心である。

abstractWe developed a statistical modeling framework to decompose LMA into two conceptual components
abstractDecomposing LMA into LMAm and LMAs improves predictions of leaf trait variation (photosynthesis, respiration, and lifespan).

Code and data availability

The paper's Stan analysis code for fitting the LMA decomposition models is explicitly stated to be publicly available on the authors' GitHub repository. The GLOPNET trait data are cited prior work, and the Panama dataset's availability is not stated, so neither qualifies as a paper-specific public asset.

Codepublic

fit using the Hamiltonian Monte Carlo algorithm (HMC) implemented 279 in Stan (Carpenter et al., 2016). Posterior estimates were obtained from three independent 280 chains of 20,000 iterations after a burn-in of 10,000 iterations, thinning at intervals of 20. The 281 Stan code use to fit models are available from Github at: 282 https://github.com/mattocci27/LMApLMAs. Convergence of the posterior distribution was 283 assessed with the Gelman-Rubin statistic with a convergence threshold of 1.1 for all 284 diagnostics (Gelman et al., 2014a). 285 286 Model selection 287 Alternative LL models (Eqs. 5 and 13; see also Notes S3) fit to Panama data were compared 288 using the WAIC (Watanabe-Akaike

Open resource ↗mattocci27/LMApLMAs · pdf-raw-page:9 lines:1-76

This is an automatically classified, unverified record. Curator approval is required before any resource enters the Catalog.