Hyperspectral plant sensing for differentiating glyphosate‐resistant and glyphosate‐susceptible johnsongrass through machine learning algorithms

Abstract

Abstract BACKGROUND Johnsongrass ( Sorghum halepense ) is one of the weeds that evolves resistance to glyphosate [ N ‐(phosphonomethyl)‐glycine], the most widely used herbicide, and the weed may cause agronomic troublesome in the southern USA. This paper reports a study on developing a hyperspectral plant sensing approach to explore the spectral features of glyphosate‐resistant (GR) and glyphosate‐sensitive (GS) plants to evaluate this approach using machine learning algorithms to differentiate between GR and GS plants. RESULTS On average, GR plants have higher spectral reflectance compared with GS plants. The sensitive spectral bands were optimally selected using the successive projections algorithm respectively wrapped with the machine learning algorithms of k‐nearest neighbors (KNN), random forest (RF), and support vector machine (SVM) with Fisher linear discriminant analysis (FLDA) to classify between GS and GS plants. At 3 weeks after transplanting (WAT) KNN and SVM could not acceptably classify the GR and GS plants but they improved significantly with the stages to have their overall accuracies reaching 73% and 77%, respectively, at 5 WAT. RF and FLDA had a better ability to classify the plants at 3 WAT but RF was low in accuracy at 2 WAT while FLDA dropped accuracy to 50% at 4 WAT from 57% at 3 WAT and raised it to 73% at 5 WAT. CONCLUSIONS Previous studies were conducted developing the hyperspectral imaging approach to differentiate GR Palmer amaranth from GS Palmer amaranth and GR Italian ryegrass from GS Italian ryegrass with classification accuracies of 90% and 80%, respectively. This study demonstrated that the hyperspectral plant sensing approach could be developed to differentiate GR johnsongrass from glyphosate‐sensitive GS johnsongrass with the highest classification accuracy of 77%. The comparison with our previous studies indicated that the similar hyperspectral approach could be used and transferred from classification across different GR and GS weed biotypes, such as Palmer amaranth, Italian ryegrass and johnsongrass, so it is highly possible for classification of more other GR and GS weed biotypes as well. On the basis of classic pattern recognition approaches the process of plant classification can be enhanced by modeling using machine learning algorithms. © 2022 Society of Chemical Industry. This article has been contributed to by U.S. Government employees and their work is in the public domain in the USA.

Plant phenotyping relevance

植物の薬剤抵抗性状態を識別するためのハイパースペクトルセンシングと機械学習分類手法の開発・評価が中心であり、単なる生物学的実験のルーチン測定ではない。

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