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Integrating 3D phenotyping and functional-structural plant models for crop ideotype breeding.

Nature Communications · 26 Jun 2026 · 10.1038/s41467-026-74679-5

Abstract

Crop ideotype breeding aims to design plant architectures that enhance yield and resource use efficiency. Accelerating this process demands a framework for assembling accurate three-dimensional (3D) architecture. This Perspective synthesizes advances in technologies and methodologies in 3D architectural phenotyping. Rapid progress has enabled translating these advances into tangible gains in breeding efficiency. To this end, we propose integrating functional-structural plant models as an overarching framework that optimizes plant architecture combinations, shifting breeding from experience-driven to predictive ideotype design. Convergence of 3D phenotyping, plant modeling and artificial intelligence holds transformative potential to accelerate breeding cycles, enhancing productivity, sustainability, and food security.

Plant phenotyping relevance

3D植物形態フェノタイピング技術・方法論を中心に統合し、機能構造モデルやAIとの連携を論じる方法論的Perspectiveである。

abstractThis Perspective synthesizes advances in technologies and methodologies in 3D architectural phenotyping.
abstractConvergence of 3D phenotyping, plant modeling and artificial intelligence holds transformative potential to accelerate breeding cycles

Code and data availability

This is a Perspective article synthesizing literature on 3D phenotyping and functional-structural plant models. It reports no original plant-phenotyping measurements, datasets, images, analysis code, or trained models of its own. Supplementary Data files are referenced but no public repository or URL for them is given.

No evidence-backed public reproduction asset is currently recorded.

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