Cluster-based photography and modeling integrated method for an efficient measurement of cassava leaf area.

Abstract

Leaf area (LA) and biomass are important agronomic indicators of the growth and health of plants. Conventional methods for measuring the LA can be challenging, time-consuming, costly, and laborious, especially for a large-scale study. A hybrid approach of cluster-based photography and modeling was, thus, developed herein to improve practicality. To this end, data on cassava palmate leaves were collected under various conditions to cover a spectrum of viable leaf shapes and sizes. A total of 1,899 leaves from 3 cassava genotypes and 5 cultivation conditions were first assigned into clusters by size, based on their length (L) and width (W). Next, 111 representative leaves from all clusters were photographed, and data from image-processing were subsequently used for model development. The model based on the product of L and W outperformed the rest (R2 = 0.9566, RMSE = 20.00). The hybrid model was successfully used to estimate the LA of greenhouse-grown cassava as validation. This represents a breakthrough in the search for efficient, practical phenotyping tools for LA estimation, especially for large-scale experiments or remote fields with limited machinery.

Plant phenotyping relevance

キャッサバ葉面積を画像処理とクラスターベースのモデルで推定する手法を開発し、温室栽培個体で検証しており、表現型取得・抽出が研究の中心である。

Code and data availability

The paper describes cassava leaf-area phenotype data (1,899 leaves; L/W/LA measurements) and provides supporting information files (S1 File calculation tables, S2 File clustering board, S3 File supplementary info) that embody the authors' hybrid phenotyping workflow. However, no authors' public URL for these assets is

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