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Chemical Fingerprinting of Heat Stress Responses in the Leaves of Common Wheat by Fourier Transform Infrared Spectroscopy.

International journal of molecular sciences · 4 Mar 2022 · 10.3390/ijms23052842

Abstract

Wheat ( Triticum aestivum L.) is known to be negatively affected by heat stress, and its production is threatened by global warming, particularly in arid regions. Thus, efforts to better understand the molecular responses of wheat to heat stress are required. In the present study, Fourier transform infrared (FTIR) spectroscopy, coupled with chemometrics, was applied to develop a protocol that monitors chemical changes in common wheat under heat stress. Wheat plants at the three-leaf stage were subjected to heat stress at a 42 °C daily maximum temperature for 3 days, and this led to delayed growth in comparison to that of the control. Measurement of FTIR spectra and their principal component analysis showed partially overlapping features between heat-stressed and control leaves. In contrast, supervised machine learning through linear discriminant analysis (LDA) of the spectra demonstrated clear discrimination of heat-stressed leaves from the controls. Analysis of LDA loading suggested that several wavenumbers in the fingerprinting region (400-1800 cm -1 ) contributed significantly to their discrimination. Novel spectrum-based biomarkers were developed using these discriminative wavenumbers that enabled the successful diagnosis of heat-stressed leaves. Overall, these observations demonstrate the versatility of FTIR-based chemical fingerprints for use in heat-stress profiling in wheat.

Plant phenotyping relevance

FTIRとケモメトリクスを用いて熱ストレス葉の化学的状態を識別・診断するプロトコルとバイオマーカーを開発しており、植物状態の取得・抽出が中心的です。

abstractFourier transform infrared (FTIR) spectroscopy, coupled with chemometrics, was applied to develop a protocol that monitors chemical changes in common wheat under heat stress.
abstractNovel spectrum-based biomarkers were developed using these discriminative wavenumbers that enabled the successful diagnosis of heat-stressed leaves.

Code and data availability

The paper's custom R script for spectral biomarker (Fm) calculation was deposited as Supplementary File S1, publicly available at the MDPI supplementary URL. The raw FTIR spectral data (358 spectra) are not stated to be publicly deposited (Data Availability Statement: 'Not applicable').

Codepublic

The R scripts were deposited in Supplementary File S1 .

Open resource ↗lines:186-204

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