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A Copy Paste and Semantic Segmentation-Based Approach for the Classification and Assessment of Significant Rice Diseases.

Plants (Basel, Switzerland) · 20 Nov 2022 · 10.3390/plants11223174

Abstract

The accurate segmentation of significant rice diseases and assessment of the degree of disease damage are the keys to their early diagnosis and intelligent monitoring and are the core of accurate pest control and information management. Deep learning applied to rice disease detection and segmentation can significantly improve the accuracy of disease detection and identification but requires a large number of training samples to determine the optimal parameters of the model. This study proposed a lightweight network based on copy paste and semantic segmentation for accurate disease region segmentation and severity assessment. First, a dataset for rice significant disease segmentation was selected and collated based on 3 open-source datasets, containing 450 sample images belonging to 3 categories of rice leaf bacterial blight, blast and brown spot. Then, to increase the diversity of samples, a data augmentation method, rice leaf disease copy paste (RLDCP), was proposed that expanded the collected disease samples with the concept of copy and paste. The new RSegformer model was then trained by replacing the new backbone network with the lightweight semantic segmentation network Segformer, combining the attention mechanism and changing the upsampling operator, so that the model could better balance local and global information, speed up the training process and reduce the degree of overfitting of the network. The results show that RLDCP could effectively improve the accuracy and generalisation performance of the semantic segmentation model compared with traditional data augmentation methods and could improve the MIoU of the semantic segmentation model by about 5% with a dataset only twice the size. RSegformer can achieve an 85.38% MIoU at a model size of 14.36 M. The method proposed in this paper can quickly, easily and accurately identify disease occurrence areas, their species and the degree of disease damage, providing a reference for timely and effective rice disease control.

Plant phenotyping relevance

イネ葉の病斑領域を画像から分割し、病害の種類と被害程度を推定する手法の開発・評価が中心であり、植物病害状態の表現型取得に該当する。

abstractThis study proposed a lightweight network based on copy paste and semantic segmentation for accurate disease region segmentation and severity assessment.
abstractRSegformer can achieve an 85.38% MIoU at a model size of 14.36 M.

Code and data availability

The paper's curated rice disease image dataset with semantic segmentation masks is publicly deposited on Kaggle by the authors, and one of the three source image datasets (Dataset 3) is also a public Kaggle dataset used directly in this study. No author analysis code or trained model checkpoint is explicitly deposited;

Datasetpublic

The three varieties of diseased rice leaf images and masks used in this study are available at https://www.kaggle.com/datasets/slygirl/rice-leaf-disease-with-segmentation-labels (accessed on 3 November 2022) and can be shared on request.

Open resource ↗Kaggle · slygirl/rice-leaf-disease-with-segmentation-labels · lines:314-332
Datasetpublic

26. Leaf Rice Disease | Kaggle. [(accessed on 7 August 2022)]. Available online: https://www.kaggle.com/datasets/tedisetiady/leaf-rice-disease-indonesia .

Open resource ↗Kaggle · tedisetiady/leaf-rice-disease-indonesia · lines:333-333

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