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Deep learning based banana plant detection and counting using high-resolution red-green-blue (RGB) images collected from unmanned aerial vehicle (UAV)

PLOS ONE · 17 Oct 2019 · 10.1371/journal.pone.0223906

Abstract

The production of banana-one of the highly consumed fruits-is highly affected due to loss of certain number of banana plants in an early phase of vegetation. This affects the ability of farmers to forecast and estimate the production of banana. In this paper, we propose a deep learning (DL) based method to precisely detect and count banana plants on a farm exclusive of other plants, using high resolution RGB aerial images collected from Unmanned Aerial Vehicle (UAV). An attempt to detect the plants on the normal RGB images resulted less than 78.8% recall for our sample images of a commercial banana farm in Thailand. To improve this result, we use three image processing methods-Linear Contrast Stretch, Synthetic Color Transform and Triangular Greenness Index-to enhance the vegetative properties of orthomosaic, generating multiple variants of orthomosaic. Then we separately train a parameter-optimized Convolutional Neural Network (CNN) on manually interpreted banana plant samples seen on each image variants, to produce multiple results of detection on our region of interest. 96.4%, 85.1% and 75.8% of plants were correctly detected on three of our dataset collected from multiple altitude of 40, 50 and 60 meters, of same farm. Further discussion on results obtained from combination of multiple altitude variants are also discussed later in the research, in an attempt to find better altitude combination for data collection from UAV for the detection of banana plants. The results showed that merging the detection results of 40 and 50 meter dataset could detect the plants missed by each other, increasing recall upto 99%.

Plant phenotyping relevance

UAV RGB画像からバナナ個体を検出・計数する画像解析手法の開発と性能評価が研究の中心であり、植物個体数という観測可能な植物形質を抽出している。

abstractwe propose a deep learning (DL) based method to precisely detect and count banana plants on a farm exclusive of other plants, using high resolution RGB aerial images collected from Unmanned Aerial Vehicle (UAV).
abstractThen we separately train a parameter-optimized Convolutional Neural Network (CNN) on manually interpreted banana plant samples seen on each image variants, to produce multiple results of detection on our region of interest.
abstractThe results showed that merging the detection results of 40 and 50 meter dataset could detect the plants missed by each other, increasing recall upto 99%.

Code and data availability

The paper's Data Availability statement deposits the paper-specific UAV-collected banana plant image datasets (the phenotyping inputs used for detection/counting) in a public Figshare repository with an authors' URL, making it directly actionable.

Datasetpublic

has-pdf yes pmc-prop-has-supplement no pmc-prop-pdf-only no pmc-prop-suppress-copyright no pmc-prop-is-real-version no pmc-prop-is-scanned-article no pmc-prop-preprint no pmc-prop-in-epmc yes pmc-license-ref CC BY Data Availability Data available from the Figshare Repository (DOIs: 10.6084/m9.figshare.7981547 ), and the URL is: https://figshare.com/s/62e391492b1be99515b4 . Data Availability Data available from the Figshare Repository (DOIs: 10.6084/m9.figshare.7981547 ), and the URL is: https://figshare.com/s/62e391492b1be99515b4 . Introduction Significance of counting banana plants

Open resource ↗Figshare · 10.6084/m9.figshare.7981547 · lines:1-36

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