Comparing Methodologies for Stomatal Analyses in the Context of Elevated Modern CO 2 .

Abstract

Leaf stomata facilitate the exchange of water and CO 2 during photosynthetic gas exchange. The shape, size, and density of leaf pores have not been constant over geologic time, and each morphological trait has potentially been impacted by changing environmental and climatic conditions, especially by changes in the concentration of atmospheric carbon dioxide. As such, stomatal parameters have been used in simple regressions to reconstruct ancient carbon dioxide, as well as incorporated into more complex gas-exchange models that also leverage plant carbon isotope ecology. Most of these proxy relationships are measured on chemically cleared leaves, although newer techniques such as creating stomatal impressions are being increasingly employed. Additionally, many of the proxy relationships use angiosperms with broad leaves, which have been increasingly abundant in the last 130 million years but are absent from the fossil record before this. We focus on the methodology to define stomatal parameters for paleo-CO 2 studies using two separate methodologies (one corrosive, one non-destructive) to prepare leaves on both scale- and broad-leaves collected from herbaria with known global atmospheric CO 2 levels. We find that the corrosive and non-corrosive methodologies give similar values for stomatal density, but that measurements of stomatal sizes, particularly guard cell width (GCW), for the two methodologies are not comparable. Using those measurements to reconstruct CO 2 via the gas exchange model, we found that reconstructed CO 2 based on stomatal impressions (due to inaccurate measurements in GCW) far exceeded measured CO 2 for modern plants. This bias was observed in both coniferous (scale-shaped) and angiosperm (broad) leaves. Thus, we advise that applications of gas exchange models use cleared leaves rather than impressions.

Plant phenotyping relevance

葉の気孔形態（密度・サイズ）を測定する2手法を比較・検証し、CO2推定への影響を評価しており、植物表現型取得法が研究の中心です。

Code and data availability

The paper's stomatal phenotyping measurements (stomatal density, guard cell length/width, CO2 reconstructions) are publicly deposited as supplemental data tables on Mendeley Data (DOI 10.17632/gs6rn9tjxn.1), explicitly linked in the Supplementary Materials and Data Availability sections. No author analysis code or phen