of 7 Funding: This research was funded by USDA National Institute of Food and Agriculture, grant number 2017-67007-25939. Institutional Review Board Statement: Not applicable. Informed Consent Statement: Not applicable. Data Availability Statement: Data is available upon request via contact with the corresponding author and at <https://github.com/zjwinn/Phenotyping-Anther-Extrusion-of-Wheat-Using-Image-Analysis>. Acknowledgments: This work is supported by the Agriculture and Food Research Initiative Competi- tive Grant 2017-67007-25939 (Wheat-CAP) from the USDA National Institute of Food and Agriculture. Conflicts of Interest: The author claims no conflict of interest. Abbreviations NOAPS Nu
Open resource ↗https://github.com/zjwinn/Phenotyping-Anther-Extrusion-of-Wheat-Using-Image-Analysis · pdf-raw-page:7 lines:1-53Unverified paper record
Phenotyping Anther Extrusion of Wheat Using Image Analysis
Agronomy · 19 Jun 2021 · 10.3390/agronomy11061244
Abstract
Phenotyping wheat (Triticum aestivum L.) is time-consuming and new methods are necessary to decrease labor. To develop a heterotic pool of male wheat lines for hybrid breeding, there must be an efficient way to measure both anther extrusion and the size of anthers. Five hundred and ninety-four soft red winter wheat lines in two replications of randomized complete block design were phenotyped for anther extrusion, a key trait for hybrid wheat production. A device was constructed to capture images using a mobile device. Four heads were sampled per line when anthesis was evident for half the heads in the plot. The extruded anthers were scraped onto a surface, their image was captured, and the area of the anthers was taken via ImageJ. The number of anthers extruded was estimated by counting the number of anthers per image and dividing by the number of heads sampled. The area per anther was taken by dividing the area of anthers per spike by the number of anthers per spike. A significant correlation (R=0.9, p
Plant phenotyping relevance
小麦の葯突出数と葯サイズを画像取得・ImageJ解析で測定する手法を開発し、大規模材料で適用・評価しており、表現型取得法が中心である。
abstractTo develop a heterotic pool of male wheat lines for hybrid breeding, there must be an efficient way to measure both anther extrusion and the size of anthers.
abstractA device was constructed to capture images using a mobile device.
abstracttheir image was captured, and the area of the anthers was taken via ImageJ.
Code and data availability
The paper's Data Availability Statement points to a public GitHub repository containing the paper's anther extrusion phenotyping data (HD, AD, AOAPS, NOAPS, APA for the HGAWN population), alongside request-based access via the corresponding author. The ImageJ macro and R analysis code are described but no separate code
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