Early detection of infestation by mustard aphid, vegetable thrips and two-spotted spider mite in bok choy with deep neural network (DNN) classification model using hyperspectral imaging data

Abstract

Although exclusion measures (e.g., air filters, biosecurity practices) can be employed to prevent occurrence of pest outbreaks, indoors vegetable farms in Singapore are still susceptible to various arthropod pests. Due to strong interest from the industry to pursue pesticide-free production, indoors pest management is often focused on early detection for timely containment and eradication, implying the importance of robust and vigorous pest monitoring programs. In recent years, application of machine vision technologies, especially hyperspectral imaging (HSI), has been studied for their capacity to early detect pest infestation. However, there is a lack of studies conducted in actual indoor environments and on multiple arthropod pests. Thus, this study aimed to non-destructively collect hyperspectral data of bok choy Brassica rapa subspecies chinensis which were healthy or infested with either mustard aphids Lipaphis erisymi, vegetable thrips Echinothrips americanus or two-spotted spider mites Tetranichus urticae in indoor environment to build deep neural network (DNN) classification model for early detection. Based on HSI data of control and infested plants collected daily over a period of two weeks, we found that point percentage change (PPC) values associated with leaf reflectance in 420–440 nm, 500–520 nm, 620–637 nm, 720–800 nm, and 850 nm were sensitive to infestation by the mentioned arthropod pests. Deep Neural Network (DNN) classification models trained on collected HSI data were found to outperform Linear Discriminant Analysis (LDA) and Support Vector Machine (SVM) classification models. DNN models achieved 92.8 ± 0.4 % overall classification accuracy across all days. As early as two days after infestation, DNN models could achieved classification precision values of 96.4 %, 96.9 %, 93.9 % and 100 % for control plants and plants infested with either aphids, spider mites or thrips respectively. These results highlight the feasibility of multiclass early detection of different arthropod pests and the potential of HSI system coupled with DNN classification as an autonomous plant health monitoring tool in indoor crop production.

Plant phenotyping relevance

植物の感染・害虫被害状態をHSIで取得し、DNNで分類する手法が研究の中心であり、植物ヘルス状態の非破壊フェノタイピングに該当する。

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