) and 77,946 (97%) ChlF transients in Y1 and Y2, respectively, were averaged, resulting in one value per trait per plot per time of measurement (N = 5,544 data points per trait in Y1; and N = 4,032 data points per trait in Y2). The raw data and the processed and cleaned datasets for both growing seasons are publicly accessible (https://doi.org/10.5281/zenodo.4305673).2.9 | Statistical analysis A linear mixed model (LMM) approach was used to analyse the resolv- able row-column designs with repeated measures for both Y1 and Y2. Single-stage analysis models were applied to partition variance com- ponents and to estimate genotypic effects for all traits based on “Best Linear Unbiased Predictio
Open resource ↗Zenodo · 10.5281/zenodo.4305673 · pdf-raw-page:6 lines:1-96Unverified paper record
High‐throughput field phenotyping reveals genetic variation in photosynthetic traits in durum wheat under drought
Plant Cell & Environment · 30 Jun 2021 · 10.1111/pce.14136
Abstract
Abstract Chlorophyll fluorescence (ChlF) is a powerful non‐invasive technique for probing photosynthesis. Although proposed as a method for drought tolerance screening, ChlF has not yet been fully adopted in physiological breeding, mainly due to limitations in high‐throughput field phenotyping capabilities. The light‐induced fluorescence transient (LIFT) sensor has recently been shown to reliably provide active ChlF data for rapid and remote characterisation of plant photosynthetic performance. We used the LIFT sensor to quantify photosynthesis traits across time in a large panel of durum wheat genotypes subjected to a progressive drought in replicated field trials over two growing seasons. The photosynthetic performance was measured at the canopy level by means of the operating efficiency of Photosystem II ( ) and the kinetics of electron transport measured by reoxidation rates ( and ). Short‐ and long‐term changes in ChlF traits were found in response to soil water availability and due to interactions with weather fluctuations. In mild drought, and were little affected, while was consistently accelerated in water‐limited compared to well‐watered plants, increasingly so with rising vapour pressure deficit. This high‐throughput approach allowed assessment of the native genetic diversity in ChlF traits while considering the diurnal dynamics of photosynthesis.
Plant phenotyping relevance
LIFTセンサーを用いた高スループットな圃場キャノピー蛍光計測が研究の中心であり、光合成形質を定量するフェノタイピング手法を実質的に適用している。
abstractThe light‐induced fluorescence transient (LIFT) sensor has recently been shown to reliably provide active ChlF data for rapid and remote characterisation of plant photosynthetic performance.
abstractWe used the LIFT sensor to quantify photosynthesis traits across time in a large panel of durum wheat genotypes subjected to a progressive drought in replicated field trials over two growing seasons.
abstractThis high‐throughput approach allowed assessment of the native genetic diversity in ChlF traits while considering the diurnal dynamics of photosynthesis.
Code and data availability
The paper's raw and processed/cleaned LIFT chlorophyll fluorescence and spectral phenotyping datasets for both growing seasons are openly deposited on Zenodo (DOI 10.5281/zenodo.4305673), as stated in the methods and data availability statement. TERRA-REF is only cited as the meteorological data provider (infraction: a
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