nd could be filtered from slow movements caused by drying. Thresholding of image differences allowed automated counting of cavitation events using the analyze-stack function in ImageJ. Full details, including an overview of the technique, image processing, as well as scripts to guide image capture and analysis, are available at http://www.opensourceov.org . A time-resolved count of cavitations in each stem, quantified as the number of pixels per event during stem drying, was compiled, and this was converted to a percentage of total pixels cavitated. The psychrometer output was then used to determine a fitted function that described the change in stem water potential over time. T
Open resource ↗www.opensourceov.org · lines:175-179Unverified paper record
Optical Measurement of Stem Xylem Vulnerability.
Plant physiology · 6 Jul 2017 · 10.1104/pp.17.00552
Abstract
The vulnerability of plant water transport tissues to a loss of function by cavitation during water stress is a key indicator of the survival capabilities of plant species during drought. Quantifying this important metric has been greatly advanced by noninvasive techniques that allow embolisms to be viewed directly in the vascular system. Here, we present a new method for evaluating the spatial and temporal propagation of embolizing bubbles in the stem xylem during imposed water stress. We demonstrate how the optical method, used previously in leaves, can be adapted to measure the xylem vulnerability of stems. Validation of the technique is carried out by measuring the xylem vulnerability of 13 conifers and two short-vesseled angiosperms and comparing the results with measurements made using the cavitron centrifuge method. Very close agreement between the two methods confirms the reliability of the new optical technique and opens the way to simple, efficient, and reliable assessment of stem vulnerability using standard flatbed scanners, cameras, or microscopes.
Plant phenotyping relevance
植物の茎木部の脆弱性を画像で定量する新規光学法を開発し、既存法との比較検証を行っており、植物状態の取得手法が中心である。
abstractHere, we present a new method for evaluating the spatial and temporal propagation of embolizing bubbles in the stem xylem during imposed water stress.
abstractValidation of the technique is carried out by measuring the xylem vulnerability of 13 conifers and two short-vesseled angiosperms and comparing the results with measurements made using the cavitron centrifuge method.
Code and data availability
The paper's optical vulnerability image-capture and analysis scripts are publicly available at the authors' OpenSourceOV site; the caviplace URL is a facility page, not a data/code asset.
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