Unverified paper record
Monitoring tropical forests with light drones: ensuring spatial and temporal consistency in stereophotogrammetric products
bioRxiv · 1 Jul 2025 · 10.1101/2025.06.27.661894
Abstract
O_LILight drones provide a cheap and effective tool to monitor forest canopy, especially in tropical and equatorial contexts, where infrastructure and resources are limiting. In these regions, good quality optical satellite images are rare, yet the stakes are maximal to characterize forest function, dynamics, diversity, and phenology, and more generally the vegetation-climate interplay. C_LIO_LIWe describe a complete processing chain based on photogrammetric tools that seeks to optimize the spatial and spectral coherence between repeat image mosaics at centimetric resolution. Our target is to allow individual tree-level monitoring over tens to hundreds of hectare scales with consumer grade equipment (i.e., quadcopter with stabilized RGB camera, standard GNSS positioning). C_LIO_LIWe demonstrate the increase in spatial precision achieved using Time-SIFT and Arosics algorithms, which allow (individually and synergistically) to reduce global and local spatial misalignment between mosaics from several meters to a few centimeters. Time-SIFT provides the advantage of increased robustness in initial image alignment and 3D reconstruction, and hence reduces occasional distortions or data gaps. Using Agisofts color and white balance corrections combined with the use of vegetation indices provides meaningful quantitative signal despite considerable changes in acquisition conditions. C_LIO_LIIn particular, indices that are less sensitive to illumination changes, like the green chromatic coordinate (GCC), allowed evidencing a seasonal signal over four years of monitoring in the evergreen moist forest at Paracou in French Guiana. The signal was decorrelated from obvious geometrical effect (sun height), and provided information on the vegetative stage at tree, species, and stand levels. C_LI Data/Code for peer reviewThe complete processing chain, as well as the data and scripts used for producing the analyses presented here, are available for review on Zenodo: https://zenodo.org/records/15449377?token=eyJhbGciOiJIUzUxMiJ9.eyJpZCI6IjdjNWExMzIzLThkNDMtNDllNy1iYWY4LTY2MGZlZjkyZmQ3OCIsImRhdGEiOnt9LCJyYW5kb20iOiI5MGQ4NTE2YTE4OGViNDQ3YTFiZmMyYTFkZDlhZTZmMiJ9.CsJ0VRuQ90A1qzO1VJC1Q9eXFSp1N5UpeJlyr6otgXRPlf-I-jcwBJ6ytiBbbu8enCNJ2Ke6-oxNV8aeJ_AWIw
Plant phenotyping relevance
ドローン画像のステレオフォトグラメトリ処理、画像整合化、色補正、植生指数を組み合わせた処理チェーンを開発・実証し、個体樹木から林分レベルの植生状態・季節性を定量化しているため、植物フェノタイピング手法が中心である。
abstractWe describe a complete processing chain based on photogrammetric tools that seeks to optimize the spatial and spectral coherence between repeat image mosaics at centimetric resolution.
abstractOur target is to allow individual tree-level monitoring over tens to hundreds of hectare scales with consumer grade equipment
abstractindices that are less sensitive to illumination changes, like the green chromatic coordinate (GCC), allowed evidencing a seasonal signal over four years of monitoring
Code and data availability
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