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Higher plant seed container germination success predicted by smart farming optical RGB approach.

Scientific reports · 21 Apr 2026 · 10.1038/s41598-026-42258-9

Abstract

The quality of forest reproductive material is crucial for successful reforestation and afforestation. While physical seed properties like mass are known indicators of quality, the potential of non-destructive, rapid color analysis for predicting germination in coniferous species requires further exploration. This study investigates the relationship between the seed coat color of individual Pinus sylvestris seeds, quantified in RGB (Red, Green, Blue) space using a flatbed scanner, and their subsequent germination in container nurseries. The resulting images were processed using ImageJ software to measure the mean pixel intensity (0–255) for the Red (R), Green (G), and Blue (B) channels from the segmented seed area, following the «seed–culture» passport methodology [Forestry Engineering Journal 14 | 55 (2024), 37–60]. From a population of individually tracked seeds, we compared the RGB values of germinated (N = 942) and non-germinated (N = 258) seeds after 30 days. Results from the Kolmogorov-Smirnov test showed that non-germinated seeds had significantly lower individual mass (p = 0.0045) and significantly higher pixel brightness values in the R-, G-, and B-channels (p < 0.0001) compared to germinated seeds. Normalized RGB indices also showed significant differences between groups. Our findings demonstrate that seeds with a lighter, more reflective epidermis – indicative of higher RGB brightness – are statistically associated with a lower probability of successful germination under container nursery conditions. This non-destructive, low-cost method shows significant promise for the rapid pre-sorting of Scots pine seeds. It offers a practical tool to improve the efficiency and predictability of seedling production in forest nurseries by increasing the proportion of viable seeds in sowing batches.

Plant phenotyping relevance

個別種子のRGB画像から種皮色を定量抽出し、発芽予測・事前選別に用いる非破壊的な表現型計測法が研究の中心である。

abstractthe potential of non-destructive, rapid color analysis for predicting germination in coniferous species requires further exploration
abstractthe seed coat color of individual Pinus sylvestris seeds, quantified in RGB (Red, Green, Blue) space using a flatbed scanner
abstractThis non-destructive, low-cost method shows significant promise for the rapid pre-sorting of Scots pine seeds.

Code and data availability

The paper openly deposits its three core phenotyping datasets in Mendeley Data: morphometric seed data (Dataset 1), the raw VIS/RGB scanner images of individual Pinus sylvestris seeds (Dataset 2), and germination outcome data (Dataset 3). All three DOIs are listed in the Data Availability statement and match allowed UR

Datasetpublic

The original morphometric data—Dataset 1—of Pinus sylvestris L. are openly available in Mendeley Data at DOI: https://doi.org/10.17632/8g258nbgmf.1

Open resource ↗Mendeley Data · 10.17632/8g258nbgmf.1 · lines:133-160
Datasetpublic

The original VIS image data of Pinus sylvestris L. are openly available in Mendeley Data at DOI: https://doi.org/10.17632/dt78jhyw2j.2

Open resource ↗Mendeley Data · 10.17632/dt78jhyw2j.2 · lines:133-160
Datasetpublic

The original germination data—Dataset 3—are openly available in Mendeley Data at DOI : https://doi.org/10.17632/hrs3fgc8tt.1

Open resource ↗Mendeley Data · 10.17632/hrs3fgc8tt.1 · lines:133-160

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