the script (R statistical language) used to compute these three indices ( stomata_arrange function) is available in the Supplementary Information .
Open resource ↗lines:298-332Unverified paper record
Stomatal Arrangement Pattern: A New Direction to Explore Plant Adaptation and Evolution.
Frontiers in Plant Science · 30 Apr 2021 · 10.3389/fpls.2021.655255
Abstract
The arrangement patterns of stomata on the leaf surface influence water loss and CO 2 uptake via transportation and diffusion between stomata, the sites of photosynthesis, and vasculature. However, the quantification of such patterns remains unclear. Based on the distance between stomata, we developed three independent indices to quantify stomatal arrangement pattern (SAP). “Stomatal evenness” was used to quantify the regularity of the distribution of stomata based on a minimum spanning tree, “stomatal divergence” described the divergence in the distribution of stomata based on their distances from their center of gravity, and “stomatal aggregation” was used to quantitatively distinguish the SAP as clustered, random, or regularly distributed based on the nearest-neighbor distances. These three indices address the shortcoming of stomatal density that only describes “abundance” and may, collectively, have a better capacity to explore crop development, plant adaptation and evolution, and potentially ultimately enable a more accurate reconstruction of the palaeoclimate.
Plant phenotyping relevance
気孔配置パターンを定量化する新しい3指標を開発しており、植物形態形質の抽出法が研究の中心である。
abstractthe quantification of such patterns remains unclear. Based on the distance between stomata, we developed three independent indices to quantify stomatal arrangement pattern (SAP).
abstract“Stomatal evenness” was used to quantify the regularity of the distribution of stomata based on a minimum spanning tree
Code and data availability
The authors state that an R script (stomata_arrange function) implementing their three stomatal arrangement pattern indices is available in the Supplementary Information, which is publicly accessible at the Frontiers supplementary material URL. No separate phenotype dataset deposit is identified; empirical photomicrogr
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