All data used in this study are publicly available at https://crops.phyzen.com/ and https://crops.phyzen.com/app
Open resource ↗crops.phyzen.com · lines:141-251Unverified paper record
CPDMS: a database system for crop physiological disorder management
Database · 1 Jan 2025 · 10.1093/database/baaf031
Abstract
Abstract As the importance of precision agriculture grows, scalable and efficient methods for real-time data collection and analysis have become essential. In this study, we developed a system to collect real-time crop images, focusing on physiological disorders in tomatoes. This system systematically collects crop images and related data, with the potential to evolve into a valuable tool for researchers and agricultural practitioners. A total of 58 479 images were produced under stress conditions, including bacterial wilt (BW), Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Spotted Wilt Virus (TSWV), drought, and salinity, across seven tomato varieties. The images include front views at 0 degrees, 120 degrees, 240 degrees, and top views and petiole images. Of these, 43 894 images were suitable for labeling. Based on this, 24 000 images were used for AI model training, and 13 037 images for model testing. By training a deep learning model, we achieved a mean Average Precision (mAP) of 0.46 and a recall rate of 0.60. Additionally, we discussed data augmentation and hyperparameter tuning strategies to improve AI model performance and explored the potential for generalizing the system across various agricultural environments. The database constructed in this study will serve as a crucial resource for the future development of agricultural AI. Database URL: https://crops.phyzen.com/
Plant phenotyping relevance
トマトの生理障害・病害を対象に画像収集データベースと深層学習解析モデルを開発しており、植物状態の取得・推定手法が研究の中心である。
titleCPDMS: a database system for crop physiological disorder management
abstractwe developed a system to collect real-time crop images, focusing on physiological disorders in tomatoes.
abstractA total of 58 479 images were produced under stress conditions, including bacterial wilt (BW), Tomato Yellow Leaf Curl Virus (TYLCV), Tomato Spotted Wilt Virus (TSWV), drought, and salinity, across seven tomato varieties.
abstractBy training a deep learning model, we achieved a mean Average Precision (mAP) of 0.46 and a recall rate of 0.60.
Code and data availability
The paper's tomato physiological-disorder image dataset (58,479 images, annotations, and AI training data) is publicly available via the authors' CPDMS database. LabelImg and YOLOv5 are generic third-party tools, not paper-specific assets.
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