Toward an Automated System for Nondestructive Estimation of Plant Biomass

Abstract

Accurate and nondestructive estimation of plant biomass is crucial for optimizing plant productivity, but existing methods are often expensive and require complex experimental setups. To address this challenge, we developed an automated system for estimating plant root and shoot biomass over the plant's lifecycle in hydroponic systems. This system employs a robotic arm and turntable to capture 40 images at equidistant angles around a hydroponically grown lettuce plant. These images are then processed into silhouettes and used in voxel-based volumetric 3D reconstruction to produce detailed 3D models. We utilize a space carving method along with a raytracing-based optical correction technique to create high-accuracy reconstructions. Analysis of these models demonstrates that our system accurately reconstructs the plant root structure and provides precise measurements of root volume, which can be calibrated to indicate biomass.

Plant phenotyping relevance

植物の根・シュートバイオマスを非破壊推定するため、ロボット撮像、シルエット処理、ボクセル型3D再構成、光学補正を開発・評価しており、表現型取得手法が研究の中心です。

Code and data availability

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